Research Publications


Stock, BC, Ward EJ, Thorson JT, Jannot JE, Semmens BX.  2019.  The utility of spatial model-based estimators of unobserved bycatch. Ices Journal of Marine Science. 76:255-267.   10.1093/icesjms/fsy153   Abstract
Tanner, MK, Moity N, Costa MT, Jarrin JRM, Aburto-Oropeza O, Salinas-de-Leon P.  2019.  Mangroves in the Galapagos: Ecosystem services and their valuation. Ecological Economics. 160:12-24.   10.1016/j.ecolecon.2019.01.024   Abstract
Giron-Nava, A, Johnson AF, Cisneros-Montemayor AM, Aburto-Oropeza O.  2019.  Managing at Maximum Sustainable Yield does not ensure economic well-being for artisanal fishers. Fish and Fisheries. 20:214-223.   10.1111/faf.12332   Abstract
Ezcurra, E, Barrios E, Ezcurra P, Ezcurra A, Vanderplank S, Vidal O, Villanueva-Almanza L, Aburto-Oropeza O.  2019.  A natural experiment reveals the impact of hydroelectric dams on the estuaries of tropical rivers. Science Advances. 5   10.1126/sciadv.aau9875   Abstract
Rowell, TJ, Aburto-Oropeza O, Cota-Nieto JJ, Steele MA, Erisman BE.  2019.  Reproductive behaviour and concurrent sound production of Gulf grouper Mycteroperca jordani (Epinephelidae) at a spawning aggregation site. Journal of Fish Biology. 94:277-296.   10.1111/jfb.13888   Abstract
Drennan, R, Wiklund H, Rouse GW, Georgieva MN, Wu X, Kobayashi G, Yoshino K, Glover AG.  2019.  Taxonomy and phylogeny of mud owls (Annelida: Sternaspidae), including a new synonymy and new records from the Southern Ocean, North East Atlantic Ocean and Pacific Ocean: challenges in morphological delimitation. Marine Biodiversity. Abstract
Busch, J, Agarwal V, Schorn M, Machado H, Moore BS, Rouse GW, Gram L, Jensen PR.  2019.  Diversity and distribution of the bmp gene cluster and its Polybrominated products in the genus Pseudoalteromonas. Environmental Microbiology. 21:1575-1585.   10.1111/1462-2920.14532   Abstract
Taylor, JRA, Scott N, Rouse GW.  2019.  Evolution of mantis shrimp telson armor and its role in ritualized fighting. Journal of the Royal Society Interface. 16:20190203.   Abstract
McCowin, MF, Rowden AA, Rouse GW.  2019.  A new record of Lamellibrachia columna (Siboglinidae, Annelida) from cold seeps off New Zealand, and an assessment of its presence in the western Pacific Ocean. Marine Biodiversity Records. 12:10.   Abstract
Breedy, O, Rouse GW, Stabbins A, Cortés J, Cordes EE.  2019.  New records of Swiftia (Cnidaria, Anthozoa, Octocorallia) from off Pacific Costa Rican margin, including a new species from methane seeps. Zootaxa. 4671:407–419.   Abstract
Layton, KKS, Rouse GW, Wilson NG.  2019.  A newly discovered radiation of endoparasitic gastropods and their coevolution with asteroid hosts in Antarctica.. BMC Evolutionary Biology. 19:180.   Abstract
Lindgren, J, Hatch A, Hourdez S, Charlotte Seid, Rouse GW.  2019.  Phylogeny, biogeography of Branchipolynoe (Polynoidae, Phyllodocida, Aciculata, Annelida), with descriptions of five new species from methane seeps and hydrothermal vents. Diversity. 11:153.   doi:10.3390/d11090153   Abstract
TIlic, E, Feerst K, Rouse GW.  2019.  Two new species of Amphiglena (Sabellidae, Annelida), with an assessment of hidden diversity in the Mediterranean. 4648:337-353.   Abstract
Watson, C, TIlic E, Rouse GW.  2019.  Revision of Hyalopale (Chrysopetalidae; Phyllodocida; Annelida): an amphi-Atlantic Hyalopale bispinosa species complex and five new species from reefs of the Caribbean Sea and Indo-Pacific Oceans. Zootaxa. 4671:339–368.   Abstract
Fox, MD, Carter AL, Edwards CB, Takeshita Y, Johnson MD, Petrovic V, Amir CG, Sala E, Sandin SA, Smith JE.  2019.  Limited coral mortality following acute thermal stress and widespread bleaching on Palmyra Atoll, central Pacific. Coral Reefs. 38:701-712.   10.1007/s00338-019-01796-7   Abstract
Kelly, LW, Nelson CE, Haas AF, Naliboff DS, Calhoun S, Carlson CA, Edwards RA, Fox MD, Hatay M, Johnson MD, Kelly ELA, Lim YW, Macherla S, Quinlan ZA, Silva GGZ, Vermeij MJA, Zgliczynski B, Sandin SA, Smith JE, Rohwer F.  2019.  Diel population and functional synchrony of microbial communities on coral reefs. Nature Communications. 10   10.1038/s41467-019-09419-z   Abstract
McNamara, DE, Cortale N, Edwards C, Eynaud Y, Sandin SA.  2019.  Insights into coral reef benthic dynamics from nonlinear spatial forecasting. Journal of the Royal Society Interface. 16   10.1098/rsif.2019.0047   Abstract
Gruetzner, J, Espejo FJJ, Lathika N, Uenzelmann-Neben G, Hall IR, Hemming SR, LeVay LJ, Barker S, Berke MA, Brentegani L, Caley T, Cartagena-Sierra A, Charles CD, Coenen JJ, Crespin JG, Franzese AM, Han X, Hines SKV, Just J, Koutsodendris A, Kubota K, Norris RD, Santos TP, Robinson R, Rolinson JM, Simon MH, Tangunan D, van der Lubbe HJL, Yamane M, Zhang H, Expedition S.  2019.  A new seismic stratigraphy in the Indian-Atlantic Ocean gateway resembles major paleo-oceanographic changes of the last 7 Ma. Geochemistry Geophysics Geosystems. 20:339-358.   10.1029/2018gc007668   Abstract
Levin, LA, Bett BJ, Gates AR, Heimbach P, Howe BM, Janssen F, McCurdy A, Ruhl HA, Snelgrove P, Stocks KI, Bailey D, Baumann-Pickering S, Beaverson C, Benfield MC, Booth DJ, Carreiro-Silva M, Colaco A, Eble MC, Fowler AM, Gjerde KM, Jones DOB, Katsumata K, Kelley D, Le Bris N, Leonardi AP, Lejzerowicz F, Macreadie PI, McLean D, Meitz F, Morato T, Netburn A, Pawlowski J, Smith CR, Sun S, Uchida H, Vardaro MF, Venkatesan R, Weller RA.  2019.  Global observing needs in the deep ocean. Frontiers in Marine Science. 6   10.3389/fmars.2019.00241   Abstract
Mullineaux, LS, Metaxas A, Beaulieu SE, Bright M, Gollner S, Grupe BM, Herrera S, Kellner JB, Levin LA, Mitarai S, Neubert MG, Thurnherr AM, Tunnicliffe V, Watanabe HK, Won YJ.  2018.  Exploring the ecology of deep-sea hydrothermal vents in a metacommunity framework. Frontiers in Marine Science. 5   10.3389/fmars.2018.00049   Abstract
Dunn, DC, Vandover CL, Etter RJ, Smith CR, Levin LA, Morato T, Colaco A, Dale AC, Gebruk AV, Gjerde KM, Halpin PN, Howell KL, Johnson D, Perez JAA, Ribeiro MC, Stuckas H, Weaver P, Participants SW.  2018.  A strategy for the conservation of biodiversity on mid-ocean ridges from deep-sea mining. Science Advances. 4   10.1126/sciadv.aar4313   Abstract
Ahern, ALM, Gómez-Gutiérrez J, Aburto-Oropeza O, Saldierna-Martínez RJ, Johnson AF, Harada AE, Sánchez-Uvera AR, Erisman B, Castro Arvizú DI, Burton RS.  2018.  DNA sequencing of fish eggs and larvae reveals high species diversity and seasonal changes in spawning activity in the southeastern Gulf of California. Marine Ecology Progress Series. 592:159-179. Abstract
Cota-Nieto, JJ, Erisman B, Aburto-Oropeza O, Moreno-Baez M, Hinojosa-Arango G, Johnson AF.  2018.  Participatory management in a small-scale coastal fishery-Punta Abreojos, Pacific coast of Baja California Sur, Mexico. Regional Studies in Marine Science. 18:68-79.   10.1016/j.rsma.2017.12.014   Abstract
Aburto-Oropeza, O, Lopez-Sagastegui C, Moreno-Baez M, Mascarenas-Osorio I, Jimenez-Esquivel V, Johnson AF, Erisman B.  2018.  Endangered species, ecosystem integrity, and human livelihoods. Conservation Letters. 11   10.1111/conl.12358   Abstract
Egerton, JP, Johnson AF, Turner J, Le Vay L, Mascarenas-Osorio I, Aburto-Oropeza O.  2018.  Hydroacoustics as a tool to examine the effects of Marine Protected Areas and habitat type on marine fish communities. Scientific Reports. 8   10.1038/s41598-017-18353-3   Abstract
Ulate, K, Alcoverro T, Arthur R, Aburto-Oropeza O, Sanchez C, Huato-Soberanis L.  2018.  Conventional MPAs are not as effective as community co-managed areas in conserving top-down control in the Gulf of California. Biological Conservation. 228:100-109.   10.1016/j.biocon.2018.09.033   Abstract
Munguia-Vega, A, Green AL, Suarez-Castillo AN, Espinosa-Romero MJ, Aburto-Oropeza O, Cisneros-Montemayor AM, Cruz-Pinon G, Danemann G, Giron-Nava A, Gonzalez-Cuellar O, Lasch C, Mancha-Cisneros MD, Marinone SG, Moreno-Baez M, Morzaria-Luna HN, Reyes-Bonilla H, Torre J, Turk-Boyer P, Walther M, Weaver AH.  2018.  Ecological guidelines for designing networks of marine reserves in the unique biophysical environment of the Gulf of California. Reviews in Fish Biology and Fisheries. 28:749-776.   10.1007/s11160-018-9529-y   Abstract
Ojeda-Ruiz, MA, Marin-Monroy EA, Hinojosa-Arango G, Flores-Irigollen A, Cota-Nieto JJ, Cavieses-Nunez RA, Aburto-Oropeza O.  2018.  Development of fisheries in Bahia Magdalena-Almejas: The need to explore new policies and management paradigms. Ocean & Coastal Management. 161:1-10.   10.1016/j.ocecoaman.2018.04.014   Abstract
Miloslavich, P, Bax NJ, Simmons SE, Klein E, Appeltans W, Aburto-Oropeza O, Garcia MA, Batten SD, Benedetti-Cecchi L, Checkley DM, Chiba S, Duffy JE, Dunn DC, Fischer A, Gunn J, Kudela R, Marsac F, Muller-Karger FE, Obura D, Shin YJ.  2018.  Essential ocean variables for global sustained observations of biodiversity and ecosystem changes. Global Change Biology. 24:2416-2433.   10.1111/gcb.14108   Abstract
Wood, CL, Zgliczynski BJ, Haupt AJ, Guerra AS, Micheli F, Sandin SA.  2018.  Human impacts decouple a fundamental ecological relationship-The positive association between host diversity and parasite diversity. Global Change Biology. 24:3666-3679.   10.1111/gcb.14159   Abstract
Ruttenberg, B, Caselle JE, Estep AJ, Johnson AE, Marhaver KL, Richter LJ, Sandin SA, Vermeij MJA, Smith JE, Grenda D, Cannon A.  2018.  Ecological assessment of the marine ecosystems of Barbuda, West Indies: Using rapid scientific assessment to inform ocean zoning and fisheries management. Plos One. 13   10.1371/journal.pone.0189355   Abstract
Comprehensive incentives for reducing Chinook salmon bycatch in the Bering Sea walleye Pollock fishery:  Individual tradable encounter credits.  2018.  George Sugihara, Afredo Giron-Nava, et al.  Regional Studies in Marine Science 22: 70-81
Declining oxygen in the global ocean and coastal waters.  2018.  Denise Breitburg, Lisa A. Levin, Daniel Conley et al. Science 359 (6371), eaam 7240. DOI: 10.1126/science.aam7240.
The balance between concepts and complexity in Ecology.  2018. Andrew F. Johnson and Susanna Lidstrom. Nature Ecology  Evolution 2:585-587
An interdisciplinary approach to evaluate the status of large-bodied Serranid fisheries: The case of Magdalena-Almejas Bay lagoon complex, Baja California Sur, Mexico. 2017. Erauskin-Extramiana, M, Herzka SZ, Hinojosa-Arango G, Aburto-Oropeza O.   Ocean & Coastal Management. 145:21-34.