Publications Using SIO-BIC Specimens

By Year

2021

2020

2019

2018

2017

 

2021

Buckeridge, J. S., Carlton, J. T., Van Syoc, R. J., Achituv, Y., Bauer, R. T., Buhl-Mortensen, L., Chan, B. K. K., Coletti, G., Collareta, A., Grygier, M. J., Hendrickx, M. E., Høeg, J. T., Jones, D., Kerckhof, F., Koči, T., Kolbasov, G. A., Laguna, J., Perreault, R., Pitombo, F. B., Poltarukha, O. P., Portell, R. W., Rouse, G., Southward, E., Spivey, H., Standing, J. D., Wares, J. P., and Yamaguchi, T. (2021). William Anderson Newman (November 13, 1927 – December 26, 2020) In memory of the distinguished invertebrate zoologist, and mentor, colleague, and friend. Proceedings of the California Academy of Sciences 67, 55–83.

Goffredi, S. K., Motooka, C., Fike, D. A., Gusmão, L. C., Tilic, E., Rouse, G. W., and Rodríguez, E. (2021). Mixotrophic chemosynthesis in a deep-sea anemone from hydrothermal vents in the Pescadero Basin, Gulf of California. BMC Biology 19, 1–18. doi:10.1186/s12915-020-00921-1

Metz, D. C. G., and Hechinger, R. F. (2021). Lynnia grapsolytica n. gen, n. sp. (Ciliophora: Apostomatida: Colliniidae), a deadly blood parasite of crabs with a novel pseudocytopharynx. Journal of Eukaryotic Microbiology 68. doi:10.1111/jeu.12847

Rouse, G. W., and Kupriyanova, E. K. (2021). Laminatubus (Serpulidae, Annelida) from eastern Pacific hydrothermal vents and methane seeps, with description of two new species. Zootaxa 4915, 1–27. doi:10.11646/zootaxa.4915.1.1

Tilic, E., Geratz, A., Rouse, G. W., and Bartolomaeus, T. (2021). Notopodial “spinning glands” of Sthenelanella (Annelida: Sigalionidae) are modified chaetal sacs. Invertebrate Biology, 1–12. doi:10.1111/ivb.12334

 

2020

Atkinson, S. D., Bartholomew, J. L., and Rouse, G. W. (2020). The invertebrate host of salmonid fish parasites Ceratonova shasta and Parvicapsula minibicornis (Cnidaria: Myxozoa), is a novel fabriciid annelid, Manayunkia occidentalis sp. nov. (Sabellida: Fabriciidae). Zootaxa 4751, 310–320. doi:10.11646/zootaxa.4751.2.6

Blake, J. A. (2020). New species and records of deep-water Orbiniidae (Annelida, Polychaeta) from the Eastern Pacific continental slope, abyssal Pacific Ocean, and the South China Sea. Zootaxa 4730, 1–61. doi:10.11646/zootaxa.4730.1.1

Goffredi, S. K., Tilic, E., Mullin, S. W., Dawson, K. S., Keller, A., Lee, R. W., Wu, F., Levin, L. A., Rouse, G. W., Cordes, E. E., and Orphan, V. J. (2020). Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage. Science Advances 6, eaay8562. doi:10.1126/sciadv.aay8562

Goto, R., Monnington, J., Sciberras, M., Hirabayashi, I., and Rouse, G. W. (2020). Phylogeny of Echiura updated, with a revised taxonomy to reflect their placement in Annelida as sister group to Capitellidae. Invertebrate Systematics 34, 101–111. doi:10.1071/IS19020

Hatch, A. S., Liew, H., Hourdez, S., and Rouse, G. W. (2020). Hungry scale worms: Phylogenetics of Peinaleopolynoe (Polynoidae, Annelida), with four new species. ZooKeys 932, 27–74. doi:10.3897/zookeys.932.48532

McCowin, M. F., Feehery, C., and Rouse, G. W. (2020). Spanning the depths or depth-restricted: Three new species of Bathymodiolus (Bivalvia, Mytilidae) and a new record for the hydrothermal vent Bathymodiolus thermophilus at methane seeps along the Costa Rica margin. Deep-Sea Research Part I: Oceanographic Research Papers 164, 103322. doi:10.1016/j.dsr.2020.103322

Salazar-Vallejo, S. I. (2020a). Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida, Sedentaria, Flabelligeridae). Zootaxa 4885, 560–578. doi:https://doi.org/10.11646/zootaxa.4885.4.6

Salazar-Vallejo, S. I. (2020b). Revision of Leocrates Kinberg, 1866 and Leocratides Ehlers, 1908 (Annelida, Errantia, Hesionidae). Zootaxa 4739, 1–114. doi:10.11646/zootaxa.4739.1.1

San Martín, G., Álvarez-Campos, P., Kondo, Y., Núñez, J., Fernández-Álamo, M. A., Pleijel, F., Goetz, F. E., Nygren, A., and Osborn, K. (2020). New symbiotic association in marine annelids: ectoparasites of comb jellies. Zoological Journal of the Linnean Society, 1–23. doi:10.1093/zoolinnean/zlaa034

Seid, C. A., Lindsay, D. J., and Rouse, G. W. (2020). A new southern record of the holopelagic annelid Poeobius meseres Heath, 1930 (Flabelligeridae). Biodiversity Data Journal 8, e58655. doi:10.3897/BDJ.8.e58655

Stiller, J., Tilic, E., Rousset, V., Pleijel, F., and Rouse, G. W. (2020). Spaghetti to a tree: A robust phylogeny for Terebelliformia (Annelida) based on transcriptomes, molecular and morphological data. Biology 9, 1–28. doi:10.3390/biology9040073

Tilic, E., Atkinson, S. D., and Rouse, G. W. (2020a). Mitochondrial genome of the freshwater annelid Manayunkia occidentalis (Sabellida: Fabriciidae). Mitochondrial DNA Part B: Resources 5, 3313–3315. doi:10.1080/23802359.2020.1815604

Tilic, E., and Rouse, G. W. (2020). Hidden in plain sight, Chaetopterus dewysee sp. nov. (Chaetopteridae, Annelida) – A new species from Southern California. European Journal of Taxonomy 643, 1–16. doi:10.5852/ejt.2020.643

Tilic, E., Rouse, G. W., and Bartolomaeus, T. (2020b). Comparative ultrastructure of the radiolar crown in Sabellida (Annelida). Zoomorphology. doi:10.1007/s00435-020-00509-x

Tilic, E., Sayyari, E., Stiller, J., Mirarab, S., and Rouse, G. W. (2020c). More is needed--Thousands of loci are required to elucidate the relationships of the ‘flowers of the sea’ (Sabellida, Annelida). Molecular Phylogenetics and Evolution 151, 106892. doi:10.1016/j.ympev.2020.106892

Tustison, C. A., Ramey-Balci, P. A., and Rouse, G. W. (2020). More knot worms: Four new Polygordius (Annelida) species from the Pacific and Caribbean. Diversity 12, 146. doi:10.3390/d12040146

Yen, N. K., and Rouse, G. W. (2020). Phylogeny, biogeography and systematics of Pacific vent, methane seep, and whale-fall Parougia (Dorvilleidae: Annelida), with eight new species. Invertebrate Systematics 34, 200–233. doi:10.1071/IS19042

Ziegler, A., Gilligan, A. M., Dillon, J. G., and Pernet, B. (2020). Schizasterid heart urchins host microorganisms in a digestive symbiosis of Mesozoic origin. Frontiers in Microbiology 11, 1697. doi:10.3389/fmicb.2020.01697.

 

2019

Breedy, O., Rouse, G. W., Stabbins, A., Cortés, J., and Cordes, E. E. (2019). New records of Swiftia (Cnidaria, Anthozoa, Octocorallia) from off the Pacific Costa Rican margin, including a new species from methane seeps. Zootaxa 4671, 407–419. doi:10.11646/zootaxa.4671.3.6

Drennan, R., Wiklund, H., Rouse, G. W., Georgieva, M. N., Wu, X., Kobayashi, G., Yoshino, K., and Glover, A. G. (2019). Taxonomy and phylogeny of mud owls (Annelida: Sternaspidae), including a new synonymy and new records from the Southern Ocean, North East Atlantic Ocean and Pacific Ocean: challenges in morphological delimitation. Marine Biodiversity 49, 2659–2697. doi:10.1007/s12526-019-00998-0

Forero Mejia, A. C., Molodtsova, T., Östman, C., Bavestrello, G., and Rouse, G. W. (2019). Molecular phylogeny of Ceriantharia (Cnidaria: Anthozoa) reveals non-monophyly of traditionally accepted families. Zoological Journal of the Linnean Society, 1–20. doi:10.1093/zoolinnean/zlz158

Langeneck, J., Barbieri, M., Maltagliati, F., and Castelli, A. (2019). Molecular phylogeny of Paraonidae (Annelida). Molecular Phylogenetics and Evolution 136, 1–13. doi:10.1016/j.ympev.2019.03.023

Layton, K. K. S., Rouse, G. W., and Wilson, N. G. (2019). A newly discovered radiation of endoparasitic gastropods and their coevolution with asteroid hosts in Antarctica. BMC Evolutionary Biology 19, 1–15. doi:10.1186/s12862-019-1499-8

Levin, L. A., and Rouse, G. W. (2019). Giant protists (xenophyophores) function as fish nurseries. Ecology 101, e02933. doi:10.1002/ecy.2933

Lindgren, J., Hatch, A. S., Hourdez, S., Seid, C. A., and Rouse, G. W. (2019). Phylogeny and biogeography of Branchipolynoe (Polynoidae, Phyllodocida, Aciculata, Annelida), with descriptions of five new species from methane seeps and hydrothermal vents. Diversity 11. doi:10.3390/d11090153

McClain, C. R., Nunnally, C., Dixon, R., Rouse, G. W., and Benfield, M. (2019). Alligators in the abyss: The first experimental reptilian food fall in the deep ocean. PLoS ONE 14, 1–14. doi:10.1371/journal.pone.0225345

McCowin, M. F., Rowden, A. A., and Rouse, G. W. (2019). A new record of Lamellibrachia columna (Siboglinidae, Annelida) from cold seeps off New Zealand, and an assessment of its presence in the western Pacific Ocean. Marine Biodiversity Records 12, 1–12. doi:10.1186/s41200-019-0169-2

Tilic, E., Feerst, K., and Rouse, G. W. (2019). Two new species of Amphiglena (Sabellidae, Annelida), with an assessment of hidden diversity in the Mediterranean. Zootaxa 4648, 337–353. doi:10.11646/zootaxa.4648.2.8

Watson, C., Tilic, E., and Rouse, G. W. (2019). Revision of Hyalopale (Chrysopetalidae; Phyllodocida; Annelida): An amphi-Atlantic Hyalopale bispinosa species complex and five new species from reefs of the Caribbean Sea and Indo-Pacific Oceans. Zootaxa 4671, 339–368. doi:10.11646/zootaxa.4671.3.2

 

2018

Dayton, P. K., Robilliard, G. A., Oliver, J. S., Kim, S., Hammerstrom, K., O’Connor, K., Fisher, J., Barber, J., and Jarrell, S. (2018). Long-term persistence of wood on the sea floor at McMurdo Sound, Antarctica. Antarctic Science 30, 355–356. doi:10.1017/S0954102018000305

Kerbl, A., Vereide, E. H., Gonzalez, B. C., Rouse, G. W., and Worsaae, K. (2018). Two new meiofaunal species of Trilobodrilus (Dinophilidae, Annelida) from California, USA. European Journal of Taxonomy 421, 1–18. doi:10.5852/ejt.2018.421

Leiva, C., Riesgo, A., Avila, C., Rouse, G. W., and Taboada, S. (2018). Population structure and phylogenetic relationships of a new shallow-water Antarctic phyllodocid annelid. Zoologica Scripta 47, 714–726. doi:10.1111/zsc.12313

Martin, J. W., Wall, A. R., Shank, T., Cha, H., Seid, C. A., and Rouse, G. W. (2018). A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) from Costa Rican methane seeps. Zootaxa 4504, 418–430. doi:10.11646/zootaxa.4504.3.7

McCowin, M. F., and Rouse, G. W. (2018a). A new Lamellibrachia species and confirmed range extension for Lamellibrachia barhami (Siboglinidae, Annelida) from Costa Rica methane seeps. Zootaxa 4504, 1–22. doi:10.11646/zootaxa.4504.1.1

McCowin, M. F., and Rouse, G. W. (2018b). Phylogeny of hydrothermal vent Iphionidae, with the description of a new species (Aphroditiformia, Annelida). ZooKeys 779, 89–107. doi:10.3897/zookeys.779.24781

Mongiardino Koch, N., Coppard, S. E., Lessios, H. A., Briggs, D. E. G., Mooi, R., and Rouse, G. W. (2018). A phylogenomic resolution of the sea urchin tree of life. BMC Evolutionary Biology 18. doi:10.1186/s12862-018-1300-4

Moore, J. M., Carvajal, J. I., Rouse, G. W., and Wilson, N. G. (2018). The Antarctic Circumpolar Current isolates and connects: Structured circumpolarity in the sea star Glabraster antarctica. Ecology and Evolution 8, 10621–10633. doi:10.1002/ece3.4551

Rouse, G. W., Carvajal, J. I., and Pleijel, F. (2018a). Phylogeny of Hesionidae (Aciculata, Annelida), with four new species from deep-sea eastern Pacific methane seeps, and resolution of the affinity of Hesiolyra. Invertebrate Systematics 32, 1050–1068. doi:10.1071/IS17092

Rouse, G. W., Goffredi, S. K., Johnson, S. B., and Vrijenhoek, R. C. (2018b). An inordinate fondness for Osedax (Siboglinidae: Annelida): Fourteen new species of bone worms from California. Zootaxa 4377, 451–489. doi:10.11646/zootaxa.4377.4.1

Taylor, K. H., Rouse, G. W., and Messing, C. G. (2018). Revising Mariametridae: the genera Dichrometra, Lamprometra, and Liparometra (Echinodermata: Crinoidea). Systematics and Biodiversity 16, 142–159. doi:10.1080/14772000.2017.1375044

Valdés, Á., Lundsten, L., and Wilson, N. G. (2018). Five new deep-sea species of nudibranchs (Gastropoda: Heterobranchia: Cladobranchia) from the Northeast Pacific. Zootaxa 4526, 401–443. doi:10.11646/zootaxa.4526.4.1

Wonham, M. J., and Hart, M. W. (2018). El Niño range extensions of Pacific sand crab (Emerita analoga) in the northeastern Pacific. Northwest Science 92, 53–60. doi:10.3955/046.092.0106

Yamaguchi, T. (2018). Data report: late Eocene-early Oligocene ostracods at IODP Site U1411, off Newfoundland, North Atlantic. In ‘Proceedings of the Integrated Ocean Drilling Program’. (Eds R. D. Norris, P. A. Wilson, P. Blum, and Expedition 342 Scientists.) (Integrated Ocean Drilling Program: College Station, TX.) doi:10.2204/iodp.proc.342.206.2018

Zhang, Y., Sun, J., Rouse, G. W., Wiklund, H., Pleijel, F., Watanabe, H. K., Chen, C., Qian, P. Y., and Qiu, J. W. (2018). Phylogeny, evolution and mitochondrial gene order rearrangement in scale worms (Aphroditiformia, Annelida). Molecular Phylogenetics and Evolution 125, 220–231. doi:10.1016/j.ympev.2018.04.002

 

2017

Alvarez-Campos, P., Giribet, G., San Martin, G., Rouse, G. W., and Riesgo, A. (2017). Straightening the striped chaos: Systematics and evolution of Trypanosyllis and the case of its pseudocryptic type species Trypanosyllis krohnii (Annelida, Syllidae). Zoological Journal of the Linnean Society 179, 492–540. doi:10.1111/zoj.12443

Eilertsen, M. H., Kongsrud, J. A., Alvestad, T., Stiller, J., Rouse, G. W., and Rapp, H. T. (2017). Do ampharetids take sedimented steps between vents and seeps? Phylogeny and habitat-use of Ampharetidae (Annelida, Terebelliformia) in chemosynthesis-based ecosystems. BMC Evolutionary Biology 17. doi:10.1186/s12862-017-1065-1

Goffredi, S. K., Johnson, S., Tunnicliffe, V., Caress, D., Clague, D., Escobar, E., Lundsten, L., Paduan, J. B., Rouse, G., Salcedo, D. L., Soto, L. A., Spelz-Madero, R., Zierenberg, R., and Vrijenhoek, R. (2017). Hydrothermal vent fields discovered in the southern Gulf of California clarify role of habitat in augmenting regional diversity. Proceedings of the Royal Society B: Biological Sciences 284, 20170817. doi:10.1098/rspb.2017.0817

Linchangco, G. V., Foltz, D. W., Reid, R., Williams, J., Nodzak, C., Kerr, A. M., Miller, A. K., Hunter, R., Wilson, N. G., Nielsen, W. J., Mah, C. L., Rouse, G. W., Wray, G. A., and Janies, D. A. (2017). The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics. Molecular Phylogenetics and Evolution 115, 161–170. doi:10.1016/j.ympev.2017.07.022

Lundsten, L., Reiswig, H. M., and Austin, W. C. (2017). Three new species of Cladorhiza (Demospongiae, Poecilosclerida, Cladorhizidae) from the Northeast Pacific Ocean. Zootaxa 4317, 247–260. doi:10.11646/zootaxa.4317.2.3

Miller, A. K., Kerr, A. M., Paulay, G., Reich, M., Wilson, N. G., Carvajal, J. I., and Rouse, G. W. (2017). Molecular phylogeny of extant Holothuroidea (Echinodermata). Molecular Phylogenetics and Evolution 111, 110–131. doi:10.1016/j.ympev.2017.02.014

Moore, J. M., Nishi, E., and Rouse, G. W. (2017). Phylogenetic analyses of Chaetopteridae (Annelida). Zoologica Scripta 46, 596–610. doi:10.1111/zsc.12238

Pasulka, A. L., Goffredi, S. K., Tavormina, P. L., Dawson, K. S., Levin, L. A., Rouse, G. W., and Orphan, V. J. (2017). Colonial tube-dwelling ciliates influence methane cycling and microbial diversity within methane seep ecosystems. Frontiers in Marine Science 3, 1–17. doi:10.3389/FMARS.2016.00276

Roux, M., and Messing, C. G. (2017). Stalked crinoids collected off California with descriptions of three new genera and two new species of Hyocrinidae (Echinodermata). Pacific Science 71, 329–365. doi:10.2984/71.3.7

Summers, M. M., Messing, C. G., and Rouse, G. W. (2017). The genera and species of Comatulidae (Comatulida: Crinoidea): Taxonomic revisions and a molecular and morphological guide. Zootaxa 4268, 151–190. doi:10.11646/zootaxa.4268.2.1

Taylor, K. H., Rouse, G. W., and Messing, C. G. (2017). Systematics of Himerometra (Echinodermata: Crinoidea: Himerometridae) based on morphology and molecular data. Zoological Journal of the Linnean Society 181, 342–356. doi:10.1093/zoolinnean/zlx009

Valdes, Á., Gosliner, T. M., and Waren, A. (2017). A new species of Parvaplustrum Powell, 1951 (Gastropoda: Heterobranchia: Aplustridae) from the northeastern Pacific. Nautilus 131, 97–100.

Xu, T., Sun, J., Lv, J., Kayama Watanabe, H., Li, T., Zou, W., Rouse, G. W., Wang, S., Qian, P. Y., Bao, Z., and Qiu, J. W. (2017). Genome-wide discovery of single nucleotide polymorphisms (SNPs) and single nucleotide variants (SNVs) in deep-sea mussels: Potential use in population genomics and cross-species application. Deep-Sea Research Part II: Topical Studies in Oceanography 137, 318–326. doi:10.1016/j.dsr2.2016.03.011

Yamaguchi, T., Matsui, H., and Nishi, H. (2017a). Taxonomy of Maastrichtian-Thanetian deep-sea ostracodes from U1407, IODP Exp 342, off Newfoundland, northwestern Atlantic, part 1: Families Cytherellidae, Bairdiidae, Pontocyprididae, Bythocytheridae, and Cytheruridae. Paleontological Research 21, 54–75. doi:10.2517/2016pr010

Yamaguchi, T., Matsui, H., and Nishi, H. (2017b). Taxonomy of Maastrichtian-Thanetian deep-sea ostracodes from U1407, IODP Exp 342, off Newfoundland, northwestern Atlantic, part 2: Families Eucytheridae, Krithidae, Thaerocytheridae, Trachyleberididae, and Xestoleberididae. Paleontological Research 21, 97–121. doi:10.2517/2016pr011

Zhang, D., Zhou, Y., Wang, C., and Rouse, G. W. (2017). A new species of Ophryotrocha (Annelida, Eunicida, Dorvilleidae) from hydrothermal vents on the Southwest Indian Ridge. ZooKeys 687, 1–9. doi:10.3897/zookeys.687.13046